Association of Polymorphic Variants in Argonaute Genes with Depression Risk in a Polish Population.
Mateusz KowalczykEdward KowalczykGrzegorz GalitaIreneusz MajsterekMonika E TalarowskaTomasz PopławskiPaweł KwiatkowskiAnna LichotaMonika SienkiewiczPublished in: International journal of molecular sciences (2022)
Argonaute (AGO) proteins, through their key role in the regulation of gene expression, participate in many biological processes, including cell differentiation, proliferation, death and DNA repair. Accurate regulation of gene expression appears to be important for the proper development of complex neural circuits. Loss of AGO proteins is known to lead to early embryonic mortality in mice with various malformations, including anomalies of the central nervous system. Single-nucleotide polymorphisms (SNPs) of AGO genes can lead to deregulation of the processes in which AGO proteins are involved. The contribution of different SNPs in depression has been extensively studied. However, there are hardly any studies on the contribution of AGO genes. The aim of our research was to assess the relationship between the occurrence of depression and the presence of SNPs in genes AGO1 (rs636882) and AGO2 (rs4961280; rs2292779; rs2977490) in a Polish population. One hundred and one subjects in the study group were diagnosed with recurrent depressive disorder by a psychiatrist. The control group comprised 117 healthy subjects. Study participants performed the HDRS (Hamilton Depression Scale) test to confirm or exclude depression and assess severity. The frequency of polymorphic variants of genes AGO1 (rs636882) and AGO2 (rs4961280; rs2292779; rs2977490) was determined using TaqMan SNP genotyping assays and the TaqMan universal PCR master mix, no AmpErase UNG. The rs4961280/AGO2 polymorphism was associated with a decrease in depression occurrence in the codominant (OR = 0.51, p = 0.034), dominant (OR = 0.49, p = 0.01), and overdominant (OR = 0.58, p = 0.049) models. Based on the obtained results, we found that the studied patients demonstrated a lower risk of depression with the presence of the polymorphic variant of the rs4961280/AGO2 gene-genotype C/A and C/A-A/A.
Keyphrases
- genome wide
- gene expression
- depressive symptoms
- dna methylation
- copy number
- sleep quality
- dna repair
- genome wide identification
- risk assessment
- dna damage
- type diabetes
- cardiovascular disease
- physical activity
- adipose tissue
- genome wide analysis
- newly diagnosed
- cardiovascular events
- insulin resistance
- cerebrospinal fluid
- prognostic factors
- solid state