Virus genotyping by massive parallel amplicon sequencing: adenovirus and enterovirus in the Norwegian MIDIA study.

Ondrej CinekLenka KramnaKarla MazankovaKateřina KunteováKateřina ChudáEric C J ClaasLars C SteneGerman Tapia

Published in: Journal of medical virology (2018)

Amplicon sequencing with a multiplex set of degenerate primers seems to be a rapid and reliable technical solution for genotyping of large collections of samples where simultaneous infections with multiple strains can be expected.

Keyphrases

high throughput
single cell
genome wide
escherichia coli
genetic diversity
real time pcr
solid state