Mono- and multi-nucleated ventricular cardiomyocytes constitute a transcriptionally homogenous cell population.
Michail YekelchykStefan GuentherJens PreussnerThomas BraunPublished in: Basic research in cardiology (2019)
Individual adult ventricular cardiomyocytes are either mono- or multi-nucleated and undergo morphological changes during cardiac hypertrophy. However, corresponding transcriptional signatures, reflecting potentially different functions or the ability for cell-cycle entry, are not known. The aim of this study was to determine the transcriptional profile of mono- and multi-nucleated adult cardiomyocytes by single-cell RNA-sequencing (scRNA-seq) and to investigate heterogeneity among cardiomyocytes under baseline conditions and in pressure-induced cardiac hypertrophy. We developed an array-based approach for scRNA-seq of rod-shaped multi-nucleated cardiomyocytes from both healthy and hypertrophic hearts. Single-cell transcriptomes of mono- or multi-nucleated cardiomyocytes were highly similar, although a certain degree of variation was noted across both populations. Non-image-based quality control allowing inclusion of damaged cardiomyocytes generated artificial cell clusters demonstrating the need for strict exclusion criteria. In contrast, cardiomyocytes isolated from hypertrophic heart after transverse aortic constriction showed heterogeneous transcriptional signatures, characteristic for hypoxia-induced responses. Immunofluorescence analysis revealed an inverse correlation between HIF1α+ cells and CD31-stained vessels, suggesting that imbalanced vascular growth in the hypertrophied heart induces cellular heterogeneity. Our study demonstrates that individual mono- and multi-nucleated cardiomyocytes express nearly identical sets of genes. Homogeneity among cardiomyocytes was lost after induction of hypertrophy due to differential HIF1α-dependent responses most likely caused by none-homogenous vessel growth.
Keyphrases
- single cell
- rna seq
- high glucose
- cord blood
- high throughput
- cell cycle
- endothelial cells
- heart failure
- genome wide
- gene expression
- left ventricular
- quality control
- magnetic resonance
- cell therapy
- spinal cord injury
- stem cells
- induced apoptosis
- magnetic resonance imaging
- mesenchymal stem cells
- pulmonary hypertension
- cell proliferation
- deep learning
- dna methylation
- pulmonary arterial hypertension
- signaling pathway
- heat stress
- heat shock protein