Genome sequence, antibiotic resistance genes, and plasmids in a monophasic variant of Salmonella typhimurium isolated from retail pork.
Anahita Ghorbani TajaniAniket SharmaNicolas BlouinBledar BishaPublished in: Microbiology resource announcements (2024)
A Salmonella isolate from retail pork was whole genome sequenced using Illumina NovaSeq6000, with a 5,320,119 bp genome and 51.06% GC content. Several antibiotic resistance genes and plasmids, including bla TEM-1 , aac(6')-IIc , IncHI2, and p0111 were obtained from subsequent analysis. These findings provide vital insights into generic determinants of antimicrobial resistance (AMR) in this foodborne pathogen.
Keyphrases
- antibiotic resistance genes
- antimicrobial resistance
- escherichia coli
- listeria monocytogenes
- klebsiella pneumoniae
- microbial community
- wastewater treatment
- anaerobic digestion
- genome wide
- multidrug resistant
- candida albicans
- gene expression
- dna methylation
- mass spectrometry
- gas chromatography
- high resolution
- data analysis