LUNet: deep learning for the segmentation of arterioles and venules in high resolution fundus images.
Jonathan FhimaJan Van EijgenMarie-Isaline Billen Moulin-RomséeHeloise BrackenierHana KulenovicValérie DebeufMarie VangilbergenMoti FreimanIngeborg StalmansJoachim A BeharPublished in: Physiological measurement (2024)
Objective. This study aims to automate the segmentation of retinal arterioles and venules (A/V) from digital fundus images (DFI), as changes in the spatial distribution of retinal microvasculature are indicative of cardiovascular diseases, positioning the eyes as windows to cardiovascular health. Approach. We utilized active learning to create a new DFI dataset with 240 crowd-sourced manual A/V segmentations performed by 15 medical students and reviewed by an ophthalmologist. We then developed LUNet, a novel deep learning architecture optimized for high-resolution A/V segmentation. The LUNet model features a double dilated convolutional block to widen the receptive field and reduce parameter count, alongside a high-resolution tail to refine segmentation details. A custom loss function was designed to prioritize the continuity of blood vessel segmentation. Main Results. LUNet significantly outperformed three benchmark A/V segmentation algorithms both on a local test set and on four external test sets that simulated variations in ethnicity, comorbidities and annotators. Significance. The release of the new datasets and the LUNet model (www.aimlab-technion.com/lirot-ai) provides a valuable resource for the advancement of retinal microvasculature analysis. The improvements in A/V segmentation accuracy highlight LUNet's potential as a robust tool for diagnosing and understanding cardiovascular diseases through retinal imaging.
Keyphrases
- deep learning
- convolutional neural network
- high resolution
- artificial intelligence
- optical coherence tomography
- diabetic retinopathy
- cardiovascular disease
- machine learning
- mass spectrometry
- medical students
- type diabetes
- tandem mass spectrometry
- cardiovascular risk factors
- metabolic syndrome
- coronary artery disease
- single cell