scReClassify: post hoc cell type classification of single-cell rNA-seq data.

Taiyun KimKitty LoThomas A GeddesHani Jieun KimJean Yee Hwa YangPengyi Yang

Published in: BMC genomics (2019)

scReClassify can be used for scRNA-seq data as a post hoc cell type classification tool to fine-tune cell type annotations generated by any cell type classification procedure. It is implemented as an R package and is freely available from https://github.com/SydneyBioX/scReClassify.

Keyphrases

rna seq
single cell
deep learning
machine learning
big data
electronic health record
high throughput
artificial intelligence
air pollution
gene expression
genome wide