Characterization of the complete mitochondrial genome of Gangetic ailia, Ailia coila (Siluriformes: Ailiidae).

Md Jobaidul Alam Sapto AndriyonoSoo Rin LeeMostafa A R HossainA T M EunusMd Tawheed Hassan Hyun-Woo Kim

Published in: Mitochondrial DNA. Part B, Resources (2019)

The first complete mitochondrial genome sequence of Ailia coila from Bangladesh was determined by the bioinformatic assembly of the next generation sequencing (NGS) reads. The constructed circular mitogenome for A. coila was 16,565 bp in length which harbored the canonical 13 protein-coding genes, 22 tRNAs, 2 rRNAs. Two non-coding regions, control region, D-loop (927 bp), and origin of light strand replication, OL (30 bp) were also well conserved in the mitogenome. Among the currently reported mitochondrial genomes in the order Siluriformes, A. coila was most closely related to Eutropiichthys vacha (AB919123) with 85.63% sequence identity.

Keyphrases

oxidative stress
transcription factor
genome wide
wastewater treatment
gene expression
copy number
small molecule