The low spike density of HIV may have evolved because of the effects of T helper cell depletion on affinity maturation.
Assaf AmitaiArup K ChakrabortyMehran KardarPublished in: PLoS computational biology (2018)
The spikes on virus surfaces bind receptors on host cells to propagate infection. High spike densities (SDs) can promote infection, but spikes are also targets of antibody-mediated immune responses. Thus, diverse evolutionary pressures can influence virus SDs. HIV's SD is about two orders of magnitude lower than that of other viruses, a surprising feature of unknown origin. By modeling antibody evolution through affinity maturation, we find that an intermediate SD maximizes the affinity of generated antibodies. We argue that this leads most viruses to evolve high SDs. T helper cells, which are depleted during early HIV infection, play a key role in antibody evolution. We find that T helper cell depletion results in high affinity antibodies when SD is high, but not if SD is low. This special feature of HIV infection may have led to the evolution of a low SD to avoid potent immune responses early in infection.
Keyphrases
- antiretroviral therapy
- immune response
- induced apoptosis
- dendritic cells
- hiv infected
- hiv positive
- regulatory t cells
- human immunodeficiency virus
- cell cycle arrest
- hiv aids
- single cell
- hepatitis c virus
- hiv testing
- machine learning
- cell therapy
- deep learning
- men who have sex with men
- endoplasmic reticulum stress
- toll like receptor
- stem cells
- inflammatory response
- genome wide
- cell death
- cell proliferation