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Structural and Mechanistic Insights into CO2 Activation by Nitrogenase Iron Protein.

Lee A RettbergMartin T StiebritzWonchull KangChi Chung LeeMarkus W RibbeYilin Hu
Published in: Chemistry (Weinheim an der Bergstrasse, Germany) (2019)
The Fe protein of nitrogenase catalyzes the ambient reduction of CO2 when its cluster is present in the all-ferrous, [Fe4 S4 ]0 oxidation state. Here, we report a combined structural and theoretical study that probes the unique reactivity of the all-ferrous Fe protein toward CO2 . Structural comparisons of the Azotobacter vinelandii Fe protein in the [Fe4 S4 ]0 and [Fe4 S4 ]+ states point to a possible asymmetric functionality of a highly conserved Arg pair in CO2 binding and reduction. Density functional theory (DFT) calculations provide further support for the asymmetric coordination of O by the "proximal" Arg and binding of C to a unique Fe atom of the all-ferrous cluster, followed by donation of protons by the proximate guanidinium group of Arg that eventually results in the scission of a C-O bond. These results provide important mechanistic and structural insights into CO2 activation by a surface-exposed, scaffold-held [Fe4 S4 ] cluster.
Keyphrases
  • density functional theory
  • metal organic framework
  • molecular dynamics
  • binding protein
  • protein protein
  • visible light
  • aqueous solution
  • small molecule
  • air pollution
  • fluorescence imaging
  • photodynamic therapy