A new experimental evidence-weighted signaling pathway resource in FlyBase.
Helen AttrillGiulia AntonazzoJoshua L GoodmanJim ThurmondVictor B StreletsNicholas H Brownnull The FlyBase ConsortiumPublished in: Development (Cambridge, England) (2024)
Research in model organisms is central to the characterization of signaling pathways in multicellular organisms. Here, we present the comprehensive and systematic curation of 17 Drosophila signaling pathways using the Gene Ontology framework to establish a dynamic resource that has been incorporated into FlyBase, providing visualization and data integration tools to aid research projects. By restricting to experimental evidence reported in the research literature and quantifying the amount of such evidence for each gene in a pathway, we captured the landscape of empirical knowledge of signaling pathways in Drosophila.
Keyphrases
- signaling pathway
- pi k akt
- epithelial mesenchymal transition
- induced apoptosis
- copy number
- systematic review
- healthcare
- magnetic resonance
- gram negative
- genome wide
- electronic health record
- gene expression
- dna methylation
- cell proliferation
- computed tomography
- oxidative stress
- genome wide identification
- endoplasmic reticulum stress