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Distinct Histone Post-translational Modifications during Plasmodium falciparum Gametocyte Development.

Sony ShresthaAmuza Byaruhanga LuckyAwtum Marie BrashearXiaolian LiLiwang CuiJun Miao
Published in: Journal of proteome research (2022)
Histones are the building units of nucleosomes, which constitute chromatin. Histone post-translational modifications (PTMs) play an essential role in epigenetic gene regulation. The Plasmodium falciparum genome encodes canonical and variant histones and a collection of conserved enzymes for histone PTMs and chromatin remodeling. Herein, we profiled the P. falciparum histone PTMs during the development of gametocytes, the obligatory stage for parasite transmission. Mass spectrometric analysis of histones extracted from the early, middle, and late stages of gametocytes identified 457 unique histone peptides with 90 PTMs, of which 50% were novel. The gametocyte histone PTMs display distinct patterns from asexual stages, with many new methylation sites in histones H3 and H3.3 ( e.g. , K14, K18, and K37). Quantitative analyses revealed a high abundance of acetylation in H3 and H4, mono-methylation of H3/H3.3 K37, and ubiquitination of H3BK112, suggesting that these PTMs play critical roles in gametocytes. Gametocyte histones also showed extensive and unique combinations of PTMs. These data indicate that the parasite harbors distinct transcription regulation mechanisms during gametocyte development and lay the foundation for further characterization of epigenetic regulation in the life cycle of the malaria parasite.
Keyphrases
  • plasmodium falciparum
  • dna methylation
  • genome wide
  • gene expression
  • transcription factor
  • life cycle
  • electronic health record
  • single cell
  • big data
  • oxidative stress
  • deep learning