Single-cell Transcriptional Landscape of Temporal Neutrophil Response to Burn Wound in Larval Zebrafish.
Yiran HouParth KhatriJulie RindyZachery SchultzAnqi GaoZhili ChenAngela L F GibsonAnna HuttenlocherHuy Q DinhPublished in: Journal of immunology (Baltimore, Md. : 1950) (2024)
Neutrophils accumulate early in tissue injury. However, the cellular and functional heterogeneity of neutrophils during homeostasis and in response to tissue damage remains unclear. In this study, we use larval zebrafish to understand neutrophil responses to thermal injury. Single-cell transcriptional mapping of myeloid cells during a 3-d time course in burn and control larvae revealed distinct neutrophil subsets and their cell-cell interactions with macrophages across time and conditions. The trajectory formed by three zebrafish neutrophil subsets resembles human neutrophil maturation, with varying transition patterns between conditions. Through ligand-receptor cell-cell interaction analysis, we found that neutrophils communicate more in burns in a pathway and temporal manner. Finally, we identified the correlation between zebrafish myeloid signatures and human burn severity, establishing GPR84+ neutrophils as a potential marker of early innate immune response in burns. This work builds a comparative single-cell transcriptomic framework to identify neutrophil markers of tissue damage using model organisms.
Keyphrases
- single cell
- rna seq
- immune response
- high throughput
- endothelial cells
- gene expression
- oxidative stress
- bone marrow
- acute myeloid leukemia
- cell therapy
- high resolution
- cell proliferation
- risk assessment
- genome wide
- zika virus
- dna methylation
- transcription factor
- climate change
- induced pluripotent stem cells
- high density
- heat shock