Login / Signup

Draft genome sequence of Bacillus velezensis 2A-2B strain: a rhizospheric inhabitant of Sporobolus airoides (Torr.) Torr., with antifungal activity against root rot causing phytopathogens.

Inés Martínez-RaudalesYumiko De La Cruz-RodríguezAlejandro Alvarado-GutiérrezJulio Vega-ArreguínAhuitz Fraire-MayorgaMiguel Alvarado-RodríguezVictor Balderas-HernándezSaul Fraire-Velázquez
Published in: Standards in genomic sciences (2017)
A Bacillus velezensis strain from the rhizosphere of Sporobolus airoides (Torr.) Torr., a grass in central-north México, was isolated during a biocontrol of phytopathogens scrutiny study. The 2A-2B strain exhibited at least 60% of growth inhibition of virulent isolates of phytopathogens causing root rot. These phytopathogens include Phytophthora capsici, Fusarium solani, Fusarium oxysporum and Rhizoctonia solani. Furthermore, the 2A-2B strain is an indolacetic acid producer, and a plant inducer of PR1, which is an induced systemic resistance related gene in chili pepper plantlets. Whole genome sequencing was performed to generate a draft genome assembly of 3.953 MB with 46.36% of GC content, and a N50 of 294,737. The genome contains 3713 protein coding genes and 89 RNA genes. Moreover, comparative genome analysis revealed that the 2A-2B strain had the greatest identity (98.4%) with Bacillus velezensis.
Keyphrases
  • genome wide
  • microbial community
  • dna methylation
  • bacillus subtilis
  • gene expression
  • drug induced
  • high resolution
  • binding protein
  • diabetic rats
  • transcription factor
  • genetic diversity
  • data analysis