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Comparative analysis of the transcriptome of the Amazonian fish species Colossoma macropomum (tambaqui) and hybrid tambacu by next generation sequencing.

Fátima GomesLuciana WatanabeJoão VianezMárcio NunesJedson Ferreira CardosoClayton LimaHoracio SchneiderIracilda Sampaio
Published in: PloS one (2019)
In spite of the lack of a reference genome, the functional annotation was successful, and confirmed a considerable difference in the specificity and levels of gene expression between the two organisms. This report provides a comprehensive baseline for the genetic management of these commercially important fishes, in particular for the identification of specific genes that may represent markers involved in the immunity, growth, and fertility of these organisms, with potential practical applications in aquaculture management.
Keyphrases
  • gene expression
  • genome wide
  • dna methylation
  • copy number
  • rna seq
  • gram negative
  • risk assessment
  • young adults