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Proteomic signatures predict preeclampsia in individual cohorts but not across cohorts - implications for clinical biomarker studies.

Mohammad S GhaemiAdi L TarcaRoberto RomeroNatalie StanleyRamin FallahzadehAthena TanadaAnthony CulosKazuo AndoXiaoyuan HanYair J BlumenfeldMaurice L DruzinYasser Y El-SayedRonald S GibbsVirginia D WinnKevin ContrepoisXuefeng B LingRonald J WongGary M ShawDavid K StevensonBrice GaudilliereNima AghaeepourMartin S Angst
Published in: The journal of maternal-fetal & neonatal medicine : the official journal of the European Association of Perinatal Medicine, the Federation of Asia and Oceania Perinatal Societies, the International Society of Perinatal Obstetricians (2021)
Results point to a broader issue relevant for proteomic and other omic discovery studies in patient cohorts suffering from a clinical syndrome, such as PE, driven by heterogeneous pathophysiologies. While novel technologies including highly multiplex proteomic arrays and adapted computational algorithms allow for novel discoveries for a particular study cohort, they may not readily generalize across cohorts. A likely reason is that the prevalence of pathophysiologic processes leading up to the "same" clinical syndrome can be distributed differently in different and smaller-sized cohorts. Signatures derived in individual cohorts may simply capture different facets of the spectrum of pathophysiologic processes driving a syndrome. Our findings have important implications for the design of omic studies of a syndrome like PE. They highlight the need for performing such studies in diverse and well-phenotyped patient populations that are large enough to characterize subsets of patients with shared pathophysiologies to then derive subset-specific signatures of sufficient predictive power.
Keyphrases
  • case report
  • case control
  • genome wide
  • machine learning
  • high throughput
  • label free
  • small molecule
  • early onset
  • dna methylation
  • gene expression
  • pregnant women
  • high density
  • real time pcr