The identification of co-expressed gene modules in Streptococcus pneumonia from colonization to infection to predict novel potential virulence genes.
Sadegh Azimzadeh JamalkandiMorteza KouhsarJafar SalimianAli AhmadiPublished in: BMC microbiology (2020)
In conclusion, the SPD algorithm, along with differentially expressed genes detection, can offer new ways of discovering new therapeutic or vaccine targeted gene products.
Keyphrases
- genome wide identification
- genome wide
- bioinformatics analysis
- genome wide analysis
- biofilm formation
- copy number
- transcription factor
- dna methylation
- escherichia coli
- staphylococcus aureus
- pseudomonas aeruginosa
- machine learning
- deep learning
- intensive care unit
- cancer therapy
- candida albicans
- gene expression
- antimicrobial resistance
- label free
- cystic fibrosis
- loop mediated isothermal amplification
- climate change
- acute respiratory distress syndrome