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Automated classification of protein subcellular localization in immunohistochemistry images to reveal biomarkers in colon cancer.

Zhen-Zhen XueYanxia WuQing-Zu GaoLiang ZhaoYing-Ying Xu
Published in: BMC bioinformatics (2020)
Our results demonstrate that using image patches and combining predefined and deep features can improve the performance of protein subcellular localization, and our model can effectively detect biomarkers based on protein subcellular translocations. This study is anticipated to be useful in annotating unknown subcellular localization for proteins and discovering new potential location biomarkers.
Keyphrases
  • deep learning
  • machine learning
  • protein protein
  • binding protein
  • high throughput
  • single cell
  • risk assessment
  • small molecule
  • climate change