Login / Signup

Transposable element subfamily annotation has a reproducibility problem.

Kaitlin M CareyGilia PattersonTravis J Wheeler
Published in: Mobile DNA (2021)
The surprisingly high level of disagreement in subfamily annotation of homologous sequences highlights a need for further research into definition of TE subfamilies, methods for representing subfamily annotation confidence of TE instances, and approaches to better utilizing such nuanced annotation data in downstream analysis.
Keyphrases
  • rna seq
  • genome wide identification
  • single cell
  • dna damage
  • electronic health record
  • dna repair
  • machine learning
  • big data
  • oxidative stress
  • deep learning
  • genetic diversity