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Halogen Bonding: A Powerful Tool for Modulation of Peptide Conformation.

Emma DaneliusHanna AnderssonPatrik JarvollKajsa LoodJürgen GräfensteinMáté Erdélyi
Published in: Biochemistry (2017)
Halogen bonding is a weak chemical force that has so far mostly found applications in crystal engineering. Despite its potential for use in drug discovery, as a new molecular tool in the direction of molecular recognition events, it has rarely been assessed in biopolymers. Motivated by this fact, we have developed a peptide model system that permits the quantitative evaluation of weak forces in a biologically relevant proteinlike environment and have applied it for the assessment of a halogen bond formed between two amino acid side chains. The influence of a single weak force is measured by detection of the extent to which it modulates the conformation of a cooperatively folding system. We have optimized the amino acid sequence of the model peptide on analogues with a hydrogen bond-forming site as a model for the intramolecular halogen bond to be studied, demonstrating the ability of the technique to provide information about any type of weak secondary interaction. A combined solution nuclear magnetic resonance spectroscopic and computational investigation demonstrates that an interstrand halogen bond is capable of conformational stabilization of a β-hairpin foldamer comparable to an analogous hydrogen bond. This is the first report of incorporation of a conformation-stabilizing halogen bond into a peptide/protein system, and the first quantification of a chlorine-centered halogen bond in a biologically relevant system in solution.
Keyphrases
  • amino acid
  • single molecule
  • magnetic resonance
  • molecular dynamics simulations
  • drug discovery
  • transition metal
  • molecular docking
  • healthcare
  • computed tomography
  • solid state
  • health information
  • protein protein