Paenibacillus arenosi sp. nov., a siderophore-producing bacterium isolated from coastal sediment.
Jihye BaekVeeraya WeerawongwiwatJong-Hwa KimJung-Hoon YoonJung-Sook LeeAmpaitip SukhoomWonyong KimPublished in: Archives of microbiology (2022)
In this study, strain CAU 1523 T , a novel Gram-positive-positive bacterium isolated from marine sediment collected from the coast of Busan, Republic of Korea, was characterized using a polyphasic taxonomic approach. This strain showed growth at a temperature range of 20-37 °C (optimum, 30 °C), a pH range of 6.5-9.5 (optimum, 7.5), and in the presence of 0-3% (w/v) NaCl (optimum, 1%). Phylogenetic analysis based on 16S rRNA gene sequencing and 92 concatenated core genes indicated that CAU 1523 T belonged to the genus Paenibacillus, sharing the highest sequence similarity with P. assamensis JCM 13186 T (98.0%). CAU 1523 T was differentiated from other Paenibacillus species by average nucleotide identity, average amino acid identity, and digital DNA-DNA hybridization values, using cut-off values of 95-96%, 90%, and 70%, respectively, for closely related strains. The genome of CAU 1523 T possessed various biosynthetic gene clusters, one of which encoded a putative siderophore-interacting protein. Siderophore production by the isolate was confirmed using the qualitative chrome azurol sulfonate (CAS) agar assay. Based on its phylogenetic and physiological characteristics, strain CAU 1523 T represents a novel, siderophore-producing species within the genus Paenibacillus, for which the name Paenibacillus arenosi sp. nov. is proposed, with the type strain CAU 1523 T (= KCTC 43108 T = MCCC 1K04063 T ).
Keyphrases
- amino acid
- genome wide
- heavy metals
- single molecule
- circulating tumor
- copy number
- cell free
- escherichia coli
- crispr cas
- nucleic acid
- systematic review
- polycyclic aromatic hydrocarbons
- climate change
- risk assessment
- dna methylation
- single cell
- genome wide analysis
- binding protein
- human health
- small molecule
- gene expression
- protein protein
- drug induced