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A conserved rRNA switch is central to decoding site maturation on the small ribosomal subunit.

Andreas SchedlbauerIdoia IturriozBorja Ochoa-LizarraldeTammo DiercksJorge Pedro López-AlonsoJosé Luis LavínTatsuya KaminishiRetina ÇapuniNeha DhimoleElisa de AstigarragaDavid Gil-CartonPaola FuciniSean R Connell
Published in: Science advances (2021)
While a structural description of the molecular mechanisms guiding ribosome assembly in eukaryotic systems is emerging, bacteria use an unrelated core set of assembly factors for which high-resolution structural information is still missing. To address this, we used single-particle cryo-electron microscopy to visualize the effects of bacterial ribosome assembly factors RimP, RbfA, RsmA, and RsgA on the conformational landscape of the 30S ribosomal subunit and obtained eight snapshots representing late steps in the folding of the decoding center. Analysis of these structures identifies a conserved secondary structure switch in the 16S ribosomal RNA central to decoding site maturation and suggests both a sequential order of action and molecular mechanisms for the assembly factors in coordinating and controlling this switch. Structural and mechanistic parallels between bacterial and eukaryotic systems indicate common folding features inherent to all ribosomes.
Keyphrases
  • high resolution
  • electron microscopy
  • single molecule
  • molecular dynamics simulations
  • transcription factor
  • molecular dynamics
  • healthcare
  • mass spectrometry
  • gene expression
  • dna methylation
  • health information