Genetic signature related to heme-hemoglobin metabolism pathway in sepsis secondary to pneumonia.
Giuseppe Gianini Figuerêido LeiteBrendon P SciclunaTom van der PollReinaldo SalomãoPublished in: NPJ systems biology and applications (2019)
Sepsis is defined as a life-threatening organ dysfunction caused by a dysregulated inflammatory response to pathogens. Bioinformatics and transcriptomics studies contribute to get a better understanding of the pathogenesis of sepsis. These studies revealed differentially expressed genes (DEGs) in sepsis involved in several pathways. Here we investigated the gene expression profiles of blood leukocytes using three microarray datasets of sepsis secondary to pneumonia, focusing on the heme/hemoglobin metabolism pathway. We demonstrate that the heme/hemoglobin metabolism pathway was found to be enriched in these three cohorts with four common genes (ALAS2, AHSP, HBD, and CA1). Several studies show that these four genes are involved in the cytoprotection of non-erythrocyte cells in response to different stress conditions. The upregulation of heme/hemoglobin metabolism in sepsis might be a protective response of white cells to the hostile environment present in septic patients (follow-up samples).
Keyphrases
- acute kidney injury
- septic shock
- intensive care unit
- genome wide
- inflammatory response
- induced apoptosis
- genome wide identification
- end stage renal disease
- single cell
- chronic kidney disease
- ejection fraction
- oxidative stress
- cell cycle arrest
- copy number
- red blood cell
- bioinformatics analysis
- endoplasmic reticulum stress
- dna methylation
- lipopolysaccharide induced
- rna seq
- toll like receptor
- patient reported outcomes
- prognostic factors
- multidrug resistant
- high resolution
- peritoneal dialysis
- stress induced
- heat stress
- extracorporeal membrane oxygenation