The complete chloroplast genome sequence H olmskioldia sanguinea retz., an ornamental plant of Lamiaceae.

Published in: Mitochondrial DNA. Part B, Resources (2020)

Holmskioldia sanguinea Retz. (Lamiaceae) is a widely cultivated ornamental plant. As a first report in the genus, we present the complete chloroplast genome sequence of H. sanguinea using genome skimming of paired-end NGS data. The total genome size measures 153,273 bp in length containing four subregions: 84,693 bp of large single-copy region, 17,330 bp small single-copy region, and a pair of inverted repeat regions, measuring 25,625 bp. The genome contains 115 genes including 80 protein-coding genes, 4 rRNAs, and 31 tRNAs. Phylogenetic analysis showed that H. sanguinea is a sister to Scutellaria in the subfamily Scutellarioideae of Lamiaceae.

Keyphrases

genome wide
genome wide identification
gene expression
amino acid
bioinformatics analysis
transcription factor
small molecule
machine learning
artificial intelligence
data analysis
plant growth