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Signal transduction mechanisms in heme-based globin-coupled oxygen sensors with a focus on a histidine kinase (<i>Af</i>GcHK) and a diguanylate cyclase (YddV or <i>Ec</i>DosC).

Jakub VávraArtur SerguninPetr JeřábekToru ShimizuMarkéta Martínková
Published in: Biological chemistry (2022)
Heme is a vital cofactor of proteins with roles in oxygen transport (e.g. hemoglobin), storage (e.g. myoglobin), and activation (e.g. P450) as well as electron transfer (e.g. cytochromes) and many other functions. However, its structural and functional role in oxygen sensing proteins differs markedly from that in most other enzymes, where it serves as a catalytic or functional center. This minireview discusses the mechanism of signal transduction in two heme-based oxygen sensors: the histidine kinase <i>Af</i>GcHK and the diguanylate cyclase YddV (<i>Ec</i>DosC), both of which feature a heme-binding domain containing a globin fold resembling that of hemoglobin and myoglobin.
Keyphrases
  • electron transfer
  • atrial fibrillation
  • machine learning
  • protein kinase
  • tyrosine kinase
  • deep learning
  • transcription factor
  • binding protein
  • neural network