Surveying alignment-free features for Ortholog detection in related yeast proteomes by using supervised big data classifiers.
Deborah GalpertAlberto FernándezFrancisco HerreraAgostinho AntunesReinaldo Molina-RuizGuillermin Agüero-ChapinPublished in: BMC bioinformatics (2018)
The incorporation of alignment-free features in supervised big data models did not significantly improve ortholog detection in yeast proteomes regarding the classification qualities achieved with just alignment-based similarity measures. However, the similarity of their classification performance to that of traditional ortholog detection methods encourages the evaluation of other alignment-free protein pair descriptors in future research.