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VARUS: sampling complementary RNA reads from the sequence read archive.

Felix BeckerWilly BruhnFelix BeckerKatharina J Hoff
Published in: BMC bioinformatics (2019)
With VARUS, genome annotation can be automatized to the extent that not even the selection and quality control of RNA-Seq has to be done manually. This introduces the possibility to have fully automatized genome annotation loops over potentially many species without incurring a loss of accuracy over a manually supervised annotation process.
Keyphrases
  • rna seq
  • quality control
  • single cell
  • total knee arthroplasty
  • knee osteoarthritis
  • machine learning
  • genome wide