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Genome-wide interrogation of structural variation reveals novel African-specific prostate cancer oncogenic drivers.

Tingting GongWeerachai JaratlerdsiriJue JiangCali WilletTracy ChewSean M PatrickRuth J LyonsAnne-Maree HaynesGabriela PasqualimIlma Simoni BrumPhillip D StrickerShingai B A MutambirwaRosemarie SadsadAnthony T PapenfussRiana M S BornmanEva K F ChanVanessa M Hayes
Published in: Genome medicine (2022)
In this first African-inclusive SV study for high-risk PCa, we demonstrate the power of SV interrogation for the identification of novel subtypes, oncogenic drivers and therapeutic targets. Identifying a novel spectrum of SVs in tumours derived from African patients provides a mechanism that may contribute, at least in part, to the observed ethnic disparity in advanced PCa presentation in men of African ancestry.
Keyphrases
  • prostate cancer
  • genome wide
  • end stage renal disease
  • newly diagnosed
  • ejection fraction
  • transcription factor
  • dna methylation
  • prognostic factors
  • radical prostatectomy
  • gene expression
  • copy number