Identification of Long Noncoding RNA Associated ceRNA Networks in Rosacea.
Lian WangRuifeng LuYujia WangXiaoyun WangDan HaoXiang WenYanmei LiMinghui ZengJiang XianPublished in: BioMed research international (2020)
Rosacea is a chronic and relapsing inflammatory cutaneous disorder with highly variable prevalence worldwide that adversely affects the health of patients and their quality of life. However, the molecular characterization of each rosacea subtype is still unclear. Furthermore, little is known about the role of long noncoding RNAs (lncRNAs) in the pathogenesis or regulatory processes of this disorder. In the current study, we established lncRNA-mRNA coexpression networks for three rosacea subtypes (erythematotelangiectatic, papulopustular, and phymatous) and performed their functional enrichment analyses using Gene Onotology, KEGG, GSEA, and WGCNA. Compared to the control group, 13 differentially expressed lncRNAs and 525 differentially expressed mRNAs were identified in the three rosacea subtypes. The differentially expressed genes identified were enriched in four signaling pathways and the GO terms found were associated with leukocyte migration. In addition, we found nine differentially expressed lncRNAs in all three rosacea subtype-related networks, including NEAT1 and HOTAIR, which may play important roles in the pathology of rosacea. Our study provided novel insights into lncRNA-mRNA coexpression networks to discover the molecular mechanisms involved in rosacea development that can be used as future targets of rosacea diagnosis, prevention, and treatment.
Keyphrases
- long noncoding rna
- network analysis
- genome wide identification
- healthcare
- long non coding rna
- multiple sclerosis
- genome wide analysis
- public health
- genome wide
- signaling pathway
- end stage renal disease
- rheumatoid arthritis
- mental health
- ejection fraction
- systemic lupus erythematosus
- epithelial mesenchymal transition
- oxidative stress
- risk assessment
- pi k akt
- peritoneal dialysis
- dna methylation
- drug induced
- social media
- climate change
- smoking cessation