3D confocal laser-scanning microscopy for large-area imaging of the corneal subbasal nerve plexus.
Stephan AllgeierAndreas BartschatSebastian BohnSabine PeschelKlaus-Martin ReichertKarsten SperlichMarcus WalcklingVeit HagenmeyerRalf MikutOliver StachsBernd KöhlerPublished in: Scientific reports (2018)
The capability of corneal confocal microscopy (CCM) to acquire high-resolution in vivo images of the densely innervated human cornea has gained considerable interest in using this non-invasive technique as an objective diagnostic tool for staging peripheral neuropathies. Morphological alterations of the corneal subbasal nerve plexus (SNP) assessed by CCM have been shown to correlate well with the progression of neuropathic diseases and even predict future-incident neuropathy. Since the field of view of single CCM images is insufficient for reliable characterisation of nerve morphology, several image mosaicking techniques have been developed to facilitate the assessment of the SNP in large-area visualisations. Due to the limited depth of field of confocal microscopy, these approaches are highly sensitive to small deviations of the focus plane from the SNP layer. Our contribution proposes a new automated solution, combining guided eye movements for rapid expansion of the acquired SNP area and axial focus plane oscillations to guarantee complete imaging of the SNP. We present results of a feasibility study using the proposed setup to evaluate different oscillation settings. By comparing different image selection approaches, we show that automatic tissue classification algorithms are essential to create high-quality mosaic images from the acquired 3D datasets.
Keyphrases
- deep learning
- high resolution
- optical coherence tomography
- genome wide
- convolutional neural network
- machine learning
- high density
- genetic diversity
- dna methylation
- peripheral nerve
- high speed
- wound healing
- mass spectrometry
- endothelial cells
- lymph node
- single molecule
- gene expression
- working memory
- tandem mass spectrometry
- cataract surgery
- raman spectroscopy
- induced pluripotent stem cells