Consistent signatures in the human gut microbiome of old- and young-onset colorectal cancer.
Youwen QinXin TongWei-Jian MeiYanshuang ChengYuanqiang ZouKai HanJiehai YuZhuye JieTao ZhangShida ZhuXin JinJian WangHuanming YangXue LiuHuanzi ZhongLiang XiaoPei-Rong DingPublished in: Nature communications (2024)
The incidence of young-onset colorectal cancer (yCRC) has been increasing in recent decades, but little is known about the gut microbiome of these patients. Most studies have focused on old-onset CRC (oCRC), and it remains unclear whether CRC signatures derived from old patients are valid in young patients. To address this, we assembled the largest yCRC gut metagenomes to date from two independent cohorts and found that the CRC microbiome had limited association with age across adulthood. Differential analysis revealed that well-known CRC-associated taxa, such as Clostridium symbiosum, Peptostreptococcus stomatis, Parvimonas micra and Hungatella hathewayi were significantly enriched (false discovery rate <0.05) in both old- and young-onset patients. Similar strain-level patterns of Fusobacterium nucleatum, Bacteroides fragilis and Escherichia coli were observed for oCRC and yCRC. Almost all oCRC-associated metagenomic pathways had directionally concordant changes in young patients. Importantly, CRC-associated virulence factors (fadA, bft) were enriched in both oCRC and yCRC compared to their respective controls. Moreover, the microbiome-based classification model had similar predication accuracy for CRC status in old- and young-onset patients, underscoring the consistency of microbial signatures across different age groups.
Keyphrases
- end stage renal disease
- escherichia coli
- ejection fraction
- newly diagnosed
- chronic kidney disease
- prognostic factors
- staphylococcus aureus
- gene expression
- small molecule
- high throughput
- dna methylation
- middle aged
- machine learning
- pseudomonas aeruginosa
- microbial community
- single cell
- patient reported
- multidrug resistant
- wastewater treatment
- klebsiella pneumoniae