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Inhibition of methyltransferase activity of enhancer of zeste 2 leads to enhanced lipid accumulation and altered chromatin status in zebrafish.

Marjo J den BroederJarle BallangbyLeonie M KammingaPeter AleströmJuliette LeglerLeif C LindemanJorke H Kamstra
Published in: Epigenetics & chromatin (2020)
Here, we show for the first time the applicability of ATAC-seq as a tool to investigate toxicological responses in zebrafish. Our analysis indicates that Ezh2 inhibition leads to a partial primed state of chromatin linked to metabolic pathways which results in gene expression changes later in development, leading to enhanced lipid accumulation. Although ATAC-seq seems promising, our in-depth assessment of the cebpa locus indicates that we need to consider underlying epigenetic marks as well.
Keyphrases
  • gene expression
  • genome wide
  • dna methylation
  • transcription factor
  • rna seq
  • single cell
  • dna damage
  • binding protein
  • optical coherence tomography
  • long non coding rna
  • oxidative stress