Cell recognition based on features extracted by AFM and parameter optimization classifiers.
Junxi WangFan YangBowei WangJing HuMengnan LiuXia WangJianjun DongGuicai SongZuobin WangPublished in: Analytical methods : advancing methods and applications (2024)
Intelligent technology can assist in the diagnosis and treatment of disease, which would pave the way towards precision medicine in the coming decade. As a key focus of medical research, the diagnosis and prognosis of cancer play an important role in the future survival of patients. In this work, a diagnostic method based on nano-resolution imaging was proposed to meet the demand for precise detection methods in medicine and scientific research. The cell images scanned by AFM were recognized by cell feature engineering and machine learning classifiers. A feature ranking method based on the importance of features to responses was used to screen features closely related to categorization and optimization of feature combinations, which helps to understand the feature differences between cell types at the micro level. The results showed that the Bayesian optimized back propagation neural network has accuracy rates of 90.37% and 92.68% on two cell datasets (HL-7702 & SMMC-7721 and GES-1 & SGC-7901), respectively. This provides an automatic analysis method for identifying cancer cells or abnormal cells, which can help to reduce the burden of medical or scientific research, decrease misjudgment and promote precise medical care for the whole society.
Keyphrases
- machine learning
- single cell
- deep learning
- neural network
- healthcare
- end stage renal disease
- chronic kidney disease
- induced apoptosis
- squamous cell carcinoma
- oxidative stress
- high throughput
- artificial intelligence
- rna seq
- bone marrow
- mass spectrometry
- high speed
- signaling pathway
- big data
- mesenchymal stem cells
- endoplasmic reticulum stress
- photodynamic therapy
- cell death
- peritoneal dialysis
- single molecule
- childhood cancer