Isolation, Characterization, and Bioherbicidal Potential of the 16-Residue Peptaibols from Emericellopsis sp. XJ1056.
Kainan SongYutong AiJianshuang ZhouBaoqing DunQun YueLiwen ZhangYuquan XuChen WangPublished in: Journal of agricultural and food chemistry (2024)
Eco-friendly bioherbicides are urgently needed for managing the problematic weed Amaranthus retroflexus . A mass spectrometry- and bioassay-guided screening approach was employed to identify phytotoxic secondary metabolites from fungi for the development of such bioherbicides. This effort led to the discovery of six phytotoxic 16-residue peptaibols, including five new compounds ( 2 - 6 ) and a known congener ( 1 ), from Emericellopsis sp. XJ1056. Their planar structures were elucidated through the analysis of tandem mass and NMR spectroscopic data. The absolute configurations of the chiral amino acids were determined by advanced Marfey's method and chiral-phase liquid chromatography-mass spectrometry (LC-MS) analysis. Bioinformatic analysis and targeted gene disruption identified the biosynthetic gene cluster for these peptaibols. Compounds 1 and 2 significantly inhibited the radicle growth of A. retroflexus seedlings, and 1 demonstrated potent postemergence herbicidal activity against A. retroflexus while exhibiting minimal toxicity to Sorghum bicolor . Structure-activity relationship analysis underscored the importance of trans -4-hydroxy-l-prolines at both the 10th and 13th positions for the herbicidal activities of these peptaibols.
Keyphrases
- mass spectrometry
- liquid chromatography
- high resolution
- capillary electrophoresis
- amino acid
- magnetic resonance
- genome wide
- small molecule
- risk assessment
- copy number
- structure activity relationship
- high throughput
- molecular docking
- ionic liquid
- transcription factor
- deep learning
- simultaneous determination
- human health
- cancer therapy
- solid phase extraction