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Meta-analysis of single-cell and single-nucleus transcriptomics reveals kidney cell type consensus signatures.

Marceau QuatredeniersAlice S SerafinAlexandre BenmerahAntonio RausellSophie SaunierAmandine Viau
Published in: Scientific data (2023)
While the amount of studies involving single-cell or single-nucleus RNA-sequencing technologies grows exponentially within the biomedical research area, the kidney field requires reference transcriptomic signatures to allocate each cluster its matching cell type. The present meta-analysis of 39 previously published datasets, from 7 independent studies, involving healthy human adult kidney samples, offers a set of 24 distinct consensus kidney cell type signatures. The use of these signatures may help to assure the reliability of cell type identification in future studies involving single-cell and single-nucleus transcriptomics while improving the reproducibility in cell type allocation.
Keyphrases
  • single cell
  • rna seq
  • case control
  • high throughput
  • genome wide
  • systematic review
  • endothelial cells
  • clinical practice
  • meta analyses
  • dna methylation