Carbapenem-resistant Klebsiella pneumoniae outbreak in a COVID-19 intensive care unit; a case-control study.
Pinar ErgenMucahide Esra KocogluMüge NuralMert Ahmet KuskucuOzlem AydinFerda Yilmaz InalHande ÖztürkAyse Canan UcisikHülya ÇaşkurluBüşra GüneysuBüşra YildirimKenan MidilliYasemin CagFerhat ArslanMustafa Haluk VahabogluPublished in: Journal of chemotherapy (Florence, Italy) (2022)
We analysed a carbapenem-resistant Klebsiella pneumoniae (CRKP) outbreak in the coronavirus disease (COVID) ICU. We retrospectively collected data from ICU records. We identified 25 cases between 12 November 2020 and 19 December 2020, and compared them to 42 controls present in the ICU during the same period. The presence of a femoral haemodialysis catheter was strongly associated with invasive CRKP infections (cases, 9 [36%]; controls, 0 [0%]; odds ratio [OR] 95% confidence intervals [CIs], 21 (5; 89)). We found a significant association between old age and CRKP infection with adverse outcomes. Sequence analysis revealed three distinct carbapenemase genes: bla NDM-1 , bla OXA-48 and bla KPC-2 . We launched rectal swab sampling upon admission to the ICU, cohorted colonized patients and cases and conducted an intensive training programme for newly employed staff. This study revealed that the emergence and dissemination of CRKP in COVID ICUs were associated with increased adverse outcomes. The presence of a femoral haemodialysis catheter was a significant risk factor for CRKP infections.
Keyphrases
- klebsiella pneumoniae
- coronavirus disease
- intensive care unit
- end stage renal disease
- multidrug resistant
- mechanical ventilation
- escherichia coli
- chronic kidney disease
- peritoneal dialysis
- sars cov
- respiratory syndrome coronavirus
- newly diagnosed
- ejection fraction
- emergency department
- single cell
- drug resistant
- acute respiratory distress syndrome
- clinical trial
- genome wide
- electronic health record
- gram negative
- gene expression
- pseudomonas aeruginosa
- cystic fibrosis
- long term care
- deep learning