GCViT: a method for interactive, genome-wide visualization of resequencing and SNP array data.

Andrew P WilkeyAnne V BrownSteven B CannonEthalinda K S Cannon

Published in: BMC genomics (2020)

GCViT provides methods for interactively visualizing SNP data on a whole genome scale, and can produce publication-ready figures. It can be used in online or local installations. GCViT enables users to confirm or identify genomics regions of interest associated with particular traits. GCViT is freely available at https://github.com/LegumeFederation/gcvit . The 1.0 version described here is available at https://doi.org/10.5281/zenodo.4008713 .

Keyphrases

genome wide
dna methylation
electronic health record
copy number
big data
high density
high resolution
social media
single cell
health information
living cells
psychometric properties
single molecule
electron microscopy