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Structure and Conformation of Novel BODIPY Ugi Adducts.

Ismael Javier Arroyo-CórdobaGonzalo Gamboa-VelázquezClaudia Gabriela Avila-OrtizMarco A Leyva-RamírezMaría Teresa Cortez-PicassoMarco A García-RevillaDiana E Ramírez-OrnelasEduardo Peña-CabreraEusebio Juaristi
Published in: ChemistryOpen (2022)
Two novel BODIPY-Ugi (boron dipyrromethene) adducts exhibit peculiar room temperature (T=20 °C) H-1 NMR spectra in that several protons located at the aromatic aniline-type ring are lost in the baseline. This observation revealed the existence of a dynamic conformational process where rotation around the C-N bond is hindered. Variable-temperature H-1 and C-13 NMR spectroscopic analysis confirmed this conclusion; that is, low-temperature spectra show distinct signals for all four aromatic protons below coalescence, whereas average signals are recorded above coalescence (T=+120 °C). Particularly interesting was the rather large difference in chemical shifts for the ortho protons below coalescence, Δδ=1.45 ppm, which was explained based on DFT computational analysis. Indeed, the calculated lowest-energy gas-phase conformation of the BODIPY Ugi adducts locates one half of the aniline-type ring in the shielding anisotropic cone of the bridge phenyl ring in the BODIPY segment. This is in contrast to the solid-state conformation established by X-ray diffraction analysis that shows a nearly parallel arrangement of the aromatic rings, probably induced by crystal packing forces.
Keyphrases
  • solid state
  • room temperature
  • magnetic resonance
  • molecular dynamics simulations
  • fluorescent probe
  • living cells
  • high resolution
  • molecular docking
  • density functional theory
  • magnetic resonance imaging
  • single cell