Making the Most of Its Short Reads: A Bioinformatics Workflow for Analysing the Short-Read-Only Data of Leishmania orientalis (Formerly Named Leishmania siamensis ) Isolate PCM2 in Thailand.
Pornchai AnuntasomboonSuradej SiripattanapipongSasimanas UnajakKiattawee ChoowongkomonRichard J S BurchmoreSaovanee LeelayoovaMathirut MungthinTeerasak E-KobonPublished in: Biology (2022)
strain PCM2 for functional genomic analysis, maximising the usage of the short-read data. This workflow would give extensive information required for identifying strain-specific markers and virulence-associated genes useful for drug and vaccine development before a more exhaustive and expensive investigation.
Keyphrases
- electronic health record
- big data
- single molecule
- escherichia coli
- pseudomonas aeruginosa
- staphylococcus aureus
- adverse drug
- gene expression
- healthcare
- emergency department
- biofilm formation
- machine learning
- transcription factor
- artificial intelligence
- drug induced
- deep learning
- bioinformatics analysis
- trypanosoma cruzi