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Characterization of a Mo-Nitrogenase Variant Containing a Citrate-Substituted Cofactor.

Jasper LiedtkeChi Chung LeeKazuki TanifujiAndrew J JasniewskiMarkus W RibbeYilin Hu
Published in: Chembiochem : a European journal of chemical biology (2020)
Nitrogenase converts N2 to NH3 , and CO to hydrocarbons, at its cofactor site. Herein, we report a biochemical and spectroscopic characterization of a Mo-nitrogenase variant expressed in an Azotobacter vinelandii strain containing a deletion of nifV, the gene encoding the homocitrate synthase. Designated NifDKCit , the catalytic component of this Mo-nitrogenase variant contains a citrate-substituted cofactor analogue. Activity analysis of NifDKCit reveals a shift of CO reduction from H2 evolution toward hydrocarbon formation and an opposite shift of N2 reduction from NH3 formation toward H2 evolution. Consistent with a shift in the Mo K-edge energy of NifDKCit relative to that of its wild-type counterpart, EPR analysis demonstrates a broadening of the line-shape and a decrease in the intensity of the cofactor-originated S=3/2 signal, suggesting a change in the spin properties of the cofactor upon citrate substitution. These observations point to a crucial role of homocitrate in substrate reduction by nitrogenase and the possibility to tune product profiles of nitrogenase reactions via organic ligand substitution.
Keyphrases
  • molecular docking
  • room temperature
  • wild type
  • copy number
  • single molecule
  • molecular dynamics
  • genome wide analysis