Plastome phylogenomic study of Gentianeae (Gentianaceae): widespread gene tree discordance and its association with evolutionary rate heterogeneity of plastid genes.

Xu ZhangYanxia SunJacob B LandisZhenyu LvJun ShenHuajie ZhangNan LinLijuan LiJiao SunTao DengHang SunHengchang Wang

Published in: BMC plant biology (2020)

Overall, our results demonstrate the heterogeneity of nucleotide substitution rates and genetic characteristics among plastid genes providing new insights into plastome evolution, while highlighting the necessity of considering gene-tree discordance into phylogenomic studies based on plastome-scale data.

Keyphrases

genome wide
genome wide identification
dna methylation
copy number
single cell
genome wide analysis
transcription factor
gene expression
bioinformatics analysis
big data