Isothermal Amplification and Hypersensitive Fluorescence Dual-Enhancement Nucleic Acid Lateral Flow Assay for Rapid Detection of Acinetobacter baumannii and Its Drug Resistance.
Qian WangShuai ZhengYong LiuChongwen WangBing GuLong ZhangShu WangPublished in: Biosensors (2023)
Acinetobacter baumannii ( A. baumannii ) is among the main pathogens that cause nosocomial infections. The ability to rapidly and accurately detect A. baumannii and its drug resistance is essential for blocking secondary infections and guiding treatments. In this study, we reported a nucleic acid fluorescent lateral flow assay (NFLFA) to identify A. baumannii and carbapenem-resistant A. baumannii (CRAB) in a rapid and quantitative manner by integrating loop-mediated isothermal amplification (LAMP) and silica-based multilayered quantum dot nanobead tag (Si@MQB). First, a rapid LAMP system was established and optimised to support the effective amplification of two bacterial genes in 35 min. Then, the antibody-modified Si@MQB was introduced to capture the two kinds of amplified DNA sequences and simultaneously detect them on two test lines of a LFA strip, which greatly improved the detection sensitivity and stability of the commonly used AuNP-based nucleic acid LFA. With these strategies, the established LAMP-NFLFA achieved detection limits of 199 CFU/mL and 287 CFU/mL for the Rec A (house-keeping gene) and bla OXA-23 (drug resistance gene) genes, respectively, within 43 min. Furthermore, the assay exhibited good repeatability and specificity for detecting target pathogens in real complex specimens and environments; thus, the proposed assay undoubtedly provides a promising and low-cost tool for the on-site monitoring of nosocomial infections.
Keyphrases
- nucleic acid
- loop mediated isothermal amplification
- acinetobacter baumannii
- multidrug resistant
- drug resistant
- pseudomonas aeruginosa
- gram negative
- sensitive detection
- high throughput
- genome wide
- genome wide identification
- low cost
- klebsiella pneumoniae
- quantum dots
- copy number
- room temperature
- genome wide analysis
- dna methylation
- transcription factor
- single molecule
- high resolution
- gene expression
- living cells
- energy transfer
- cell free
- bioinformatics analysis
- ionic liquid