Exploring the advances of single-cell RNA sequencing in thyroid cancer: a narrative review.
Joecelyn Kirani TanWireko Andrew AwuahSakshi RoyTomas FerreiraArjun AhluwaliaSaibaba GuggilapuMahnoor JavedMuhammad Mikail Athif Zhafir AsyuraFavour Tope AdebusoyeKrishna RamamoorthyEmma PaolettiToufik Abdul-RahmanOlha PrykhodkoDenys OvechkinPublished in: Medical oncology (Northwood, London, England) (2023)
Thyroid cancer, a prevalent form of endocrine malignancy, has witnessed a substantial increase in occurrence in recent decades. To gain a comprehensive understanding of thyroid cancer at the single-cell level, this narrative review evaluates the applications of single-cell RNA sequencing (scRNA-seq) in thyroid cancer research. ScRNA-seq has revolutionised the identification and characterisation of distinct cell subpopulations, cell-to-cell communications, and receptor interactions, revealing unprecedented heterogeneity and shedding light on novel biomarkers for therapeutic discovery. These findings aid in the construction of predictive models on disease prognosis and therapeutic efficacy. Altogether, scRNA-seq has deepened our understanding of the tumour microenvironment immunologic insights, informing future studies in the development of effective personalised treatment for patients. Challenges and limitations of scRNA-seq, such as technical biases, financial barriers, and ethical concerns, are discussed. Advancements in computational methods, the advent of artificial intelligence (AI), machine learning (ML), and deep learning (DL), and the importance of single-cell data sharing and collaborative efforts are highlighted. Future directions of scRNA-seq in thyroid cancer research include investigating intra-tumoral heterogeneity, integrating with other omics technologies, exploring the non-coding RNA landscape, and studying rare subtypes. Overall, scRNA-seq has transformed thyroid cancer research and holds immense potential for advancing personalised therapies and improving patient outcomes. Efforts to make this technology more accessible and cost-effective will be crucial to ensuring its widespread utilisation in healthcare.
Keyphrases
- single cell
- rna seq
- artificial intelligence
- machine learning
- high throughput
- deep learning
- big data
- healthcare
- end stage renal disease
- chronic kidney disease
- quality improvement
- newly diagnosed
- risk assessment
- current status
- convolutional neural network
- mesenchymal stem cells
- social media
- prognostic factors
- bone marrow
- climate change
- dna methylation
- replacement therapy
- patient reported outcomes