Dense functional and molecular readout of a circuit hub in sensory cortex.
Cameron CondylisAbed GhanbariNikita ManjrekarKarina BistrongShenqin YaoZizhen YaoThuc Nghi NguyenHongkui ZengBosiljka TasicJerry L ChenPublished in: Science (New York, N.Y.) (2022)
Although single-cell transcriptomics of the neocortex has uncovered more than 300 putative cell types, whether this molecular classification predicts distinct functional roles is unclear. We combined two-photon calcium imaging with spatial transcriptomics to functionally and molecularly investigate cortical circuits. We characterized behavior-related responses across major neuronal subclasses in layers 2 or 3 of the primary somatosensory cortex as mice performed a tactile working memory task. We identified an excitatory intratelencephalic cell type, Baz1a, that exhibits high tactile feature selectivity. Baz1a neurons homeostatically maintain stimulus responsiveness during altered experience and show persistent enrichment of subsets of immediately early genes. Functional and anatomical connectivity reveals that Baz1a neurons residing in upper portions of layers 2 or 3 preferentially innervate somatostatin-expressing inhibitory neurons. This motif defines a circuit hub that orchestrates local sensory processing in superficial layers of the neocortex.
Keyphrases
- single cell
- working memory
- rna seq
- spinal cord
- functional connectivity
- machine learning
- transcranial direct current stimulation
- deep learning
- high throughput
- bioinformatics analysis
- resting state
- high resolution
- solar cells
- network analysis
- genome wide
- stem cells
- peripheral blood
- cell therapy
- type diabetes
- metabolic syndrome
- bone marrow
- gene expression
- dna methylation
- mesenchymal stem cells
- photodynamic therapy
- neuroendocrine tumors