Ultra-Fast Single-Nucleotide-Variation Detection Enabled by Argonaute-Mediated Transistor Platform.
Derong KongShen ZhangMingquan GuoShenwei LiQiang WangJian GouYungen WuYiheng ChenYuetong YangChanghao DaiZhengan TianAndrew Thye Shen WeeYunqi LiuDacheng WeiPublished in: Advanced materials (Deerfield Beach, Fla.) (2023)
"Test-and-go" single-nucleotide variation (SNV) detection within several minutes remains challenging, especially in low-abundance samples, since existing methods face a trade-off between sensitivity and testing speed. Sensitive detection usually relies on complex and time-consuming nucleic acid amplification or sequencing. Here, we develop a graphene field-effect transistor (GFET) platform mediated by Argonaute protein that enables rapid, sensitive and specific SNV detection. The Argonaute protein provides a nanoscale binding channel to preorganize the DNA probe, accelerating target binding and rapidly recognizing SNVs with single-nucleotide resolution in unamplified tumor-associated microRNA, circulating tumor DNA, virus RNA and reverse transcribed cDNA when a mismatch occurs in the seed region. An integrated microchip simultaneously detects multiple SNVs in agreement with sequencing results within 5 min, achieving the fastest SNV detection in a "test-and-go" manner without the requirement of nucleic acid extraction, reverse transcription and amplification. This article is protected by copyright. All rights reserved.