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Rapid bacterial evaluation beyond the colony forming unit in osteomyelitis.

Qi SunKimberley HuynhDzenita MuratovicNicholas J GunnAnja R ZelmerLucian Bogdan SolomonGerald J AtkinsDongqing Yang
Published in: eLife (2024)
Examination of bacteria/host cell interactions is important for understanding the aetiology of many infectious diseases. The colony forming unit (CFU) has been the standard for quantifying bacterial burden for the past century, however, this suffers from low sensitivity and is dependent on bacterial culturability in vitro. Our data demonstrate the discrepancy between the CFU and bacterial genome copy number in an osteomyelitis-relevant co-culture system and we confirm diagnosis and quantify bacterial load in clinical bone specimens. This study provides an improved workflow for the quantification of bacterial burden in such cases.
Keyphrases
  • copy number
  • mitochondrial dna
  • genome wide
  • electronic health record
  • dna methylation
  • single cell
  • stem cells
  • gene expression
  • deep learning
  • mesenchymal stem cells
  • bone mineral density
  • soft tissue
  • bone loss