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A deconvolution method and its application in analyzing the cellular fractions in acute myeloid leukemia samples.

Huamei LiAmit SharmaWenglong MingXiao SunHongde Liu
Published in: BMC genomics (2020)
Taken together, we developed a freely-available and open-source tool LinDeconSeq ( https://github.com/lihuamei/LinDeconSeq ), which includes marker identification and deconvolution procedures. LinDeconSeq is comparable to other current methods in terms of accuracy when applied to benchmark datasets and has broad application in clinical outcome and disease-specific molecular mechanisms.
Keyphrases
  • rna seq
  • bioinformatics analysis