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From cytogenetics to cytogenomics: whole-genome sequencing as a first-line test comprehensively captures the diverse spectrum of disease-causing genetic variation underlying intellectual disability.

Anna LindstrandJesper EisfeldtMaria PetterssonClaudia M B CarvalhoMalin KvarnungGiedre GrigelionieneBritt-Marie AnderlidOlof BjerinPeter GustavssonAnna HammarsjöPatrik Georgii-HemmingErik IwarssonMaria Johansson-SollerKristina Lagerstedt-RobinsonAgne LiedenMåns MagnussonMarcel MartinHelena MalmgrenMagnus NordenskjöldAmeli NorlingEllika SahlinHenrik StranneheimEmma ThamJosephine WincentSofia YgbergAnna WedellValtteri WirtaAnn NordgrenJohanna LundinDaniel Nilsson
Published in: Genome medicine (2019)
The overall diagnostic rate of 27% was more than doubled compared to clinical microarray (12%). Using WGS, we detected a wide range of SVs with high accuracy. Since the WGS data also allowed for analysis of SNVs, UPD, and STRs, it represents a powerful comprehensive genetic test in a clinical diagnostic laboratory setting.
Keyphrases
  • intellectual disability
  • autism spectrum disorder
  • genome wide
  • gene expression
  • copy number
  • artificial intelligence
  • deep learning