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Molecular Characterisation of Epstein-Barr Virus in Classical Hodgkin Lymphoma.

Valerija BegićPetra KoraćSlavko GašparovMarija RozmanPetra SimicicSnjezana Zidovec Lepej
Published in: International journal of molecular sciences (2022)
Hodgkin lymphomas (HLs) are a heterogeneous group of lymphoid neoplasia associated with Epstein-Barr virus (EBV) infection. EBV, considered to be an important etiological co-factor in approximately 1% of human malignancies, can be classified into two genotypes based on EBNA-2, EBNA-3A and EBNA-3C sequences, and into genetic variants based on the sequence variation of the gene coding for the LMP1 protein. Here, we present the results on the distribution of EBV genotypes 1 and 2 as well as LMP1 gene variants in 50 patients with EBV-positive classical HL selected from a cohort of 289 histologically verified cases collected over a 9-year period in a tertiary clinical center in the Southeast of Europe. The population-based sequencing of the EBNA-3C gene showed the exclusive presence of EBV genotype 1 in all cHL samples. The analysis of EBV LMP1 variant distribution showed a predominance of the wild-type strain B95-8 and the Mediterranean subtype with 30 bp deletion. These findings could contribute to the understanding of EBV immunobiology in cHL as well as to the development of a prophylactic and therapeutic vaccine.
Keyphrases
  • epstein barr virus
  • diffuse large b cell lymphoma
  • hodgkin lymphoma
  • copy number
  • genome wide
  • endothelial cells
  • genome wide identification
  • single cell
  • transcription factor
  • single molecule