Evidence of a Protein-Coding Gene Antisense to the U L 5 Gene in Bovine Herpesvirus I.
Victoria A JeffersonHannah BostickDarby OldenburgFlorencia MeyerPublished in: Viruses (2023)
Bovine herpesvirus type 1 (BoHV-1) is an important agricultural pathogen that infects cattle and other ruminants worldwide. Though it was first sequenced and annotated over twenty years ago, the Cooper strain, used in this study, was sequenced as recently as 2012 and is currently said to encode 72 unique proteins. However, tandem mass spectrometry has identified several peptides produced during active infection that align with the BoHV-1 genome in unannotated regions. One of these abundant peptides, "ORF M", aligned antisense to the DNA helicase/primase protein U L 5. This study characterizes the novel transcript and its protein product and provides evidence to support the existence of homolog protein-coding genes in other Herpesviruses.
Keyphrases
- amino acid
- tandem mass spectrometry
- genome wide
- protein protein
- binding protein
- genome wide identification
- liquid chromatography
- gene expression
- small molecule
- heavy metals
- high resolution
- dna methylation
- risk assessment
- nucleic acid
- simultaneous determination
- candida albicans
- gas chromatography
- rna seq
- single molecule
- cell free
- ms ms
- single cell
- human health