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Optimization and parallelization of the discrete ordinate method for radiation transport simulation in OpenFOAM: Hierarchical combination of shared and distributed memory approaches.

Jose Moreno-SanSegundoCintia CasadoDavid ConchaAntonio S MontemayorJavier Marugán
Published in: Open research Europe (2021)
This paper describes the reduction in memory and computational time for the simulation of complex radiation transport problems with the discrete ordinate method (DOM) model in the open-source computational fluid dynamics platform OpenFOAM. Finite volume models require storage of vector variables in each spatial cell; DOM introduces two additional discretizations, in direction and wavelength, making memory a limiting factor. Using specific classes for radiation sources data, changing the store of fluxes and other minor changes allowed a reduction of 75% in memory requirements. Besides, a hierarchical parallelization was developed, where each node of the standard parallelization uses several computing threads, allowing higher speed and scalability of the problem. This architecture, combined with optimization of some parts of the code, allowed a global speedup of x15. This relevant reduction in time and memory of radiation transport opens a new horizon of applications previously unaffordable.
Keyphrases
  • working memory
  • mental health
  • radiation induced
  • stem cells
  • high throughput
  • lymph node
  • drinking water
  • radiation therapy
  • electronic health record
  • big data
  • artificial intelligence
  • organic matter